miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST035361
species:
Apis mellifera
miRNA family:
mir-87
source:
miRBase, original name:
ame-mir-87-1
(
MI0005743
)
Taxonomy by NCBI:
Apis mellifera
Apis
Apini
Apinae
Apidae
Apoidea
Aculeata
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTGAGCAAAGTTTCAGGTGT
miRNA*
GCCTGAAATTTGCTTTTTACCT
mismatches:
0
bulges:
4
View larger
pre-miRNA
ACAGTACTCTTAC
GCCTGAAATTTGCTTTTTACCT
GGCCCTCGTGCTCTCTTACTTTGAGAAAATAAAG
GTGAGCAAAGTTTCAGGTGT
GTGAGTGCGTT
dot-bracket secondary structure
...((((((.(((
(((((((((((((((...((((
.((......))((((.......))))......))
)))))).)))))))))))))
).))))))...
SIMILARITIES
miRBase
isc-mir-87
:
0.000001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-87: 9e-51
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
array
references
[
1
] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG,
Genome Biol. 8:R97(2007).
,
"Computational and transcriptional evidence for microRNAs in the honey bee genome"