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ABOUT THIS RECORD

ID: MNEST035400
species: Apis mellifera
miRNA family: mir-928
source: miRBase, original name: ame-mir-928 (MI0005749)

Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGCTGTGGAAGCTGGCGAA

miRNA*
CACCCAGTCCCCGTACAGTTACCTGTGGACCAATACCAGCACCGCGCCTGAA

mismatches: 6
bulges: 35

View larger
pre-miRNA
GTCCAGTATTCCTGGCTGTGGAAGCTGGCGAACGTCACCCAGTCCCCGTACAGTTACCTGTGGACCAATACCAGCACCGCGCCTGAATTAGTTGCGGGAC


dot-bracket secondary structure
((((.((((((..(((.((((..(((((.(.....).....((((....((((....)))))))).....))))).))))))).)))).....)).))))



SIMILARITIES
miRBase nvi-mir-928: 0.0000003

PMRD no hits

microPC no hits
UniProt sp|Q02280|KCNAE_DROME: 0.000000004

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: array, RTPCR

references

[1] Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG, Genome Biol. 8:R97(2007)., "Computational and transcriptional evidence for microRNAs in the honey bee genome"




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