miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST035405
species: Apis mellifera
source: miRBase, original name: ame-mir-980 (MI0016244)

Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGCTGCCTTTTGAAGGGCAACA

miRNA*
CGGCTCGTCATCGGGCACTTTGC

mismatches: 6
bulges: 0

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pre-miRNA
AGCTGATTACGATGCGGCTCGTCATCGGGCACTTTGCTATTTTTTAAACGCAAGCTGCCTTTTGAAGGGCAACACCGTACTCAGTG

dot-bracket secondary structure
.(((((.((((.((..((((.(((..(((((.(((((............))))).)))))..))).))))..)).)))).))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID

references

[1] Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F, Insect Mol Biol. 19:799-805(2010)., "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera"




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