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ABOUT THIS RECORD

ID: MNEST035585
species: Bombyx mori
miRNA family: mir-927
source: miRBase, original name: bmo-mir-1926 (MI0008394)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGAATTCTAAAGCAAAAAGG

miRNA*
ATTTCGTTTTAGAATCCAAA

mismatches: 4
bulges: 1

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pre-miRNA
GTGGCAGTTATTTCGTTTTAGAATCCAAACGCTTTGCCCAACTACTTGGCAACGGTAAAGCGTAGGAATTCTAAAGCAAAAAGGCTGCAT

dot-bracket secondary structure
...(((((..(((.((((((((((((..((((((((((.........(....))))))))))).)).)))))))))).)))..)))))..


SIMILARITIES
miRBase bmo-mir-927: 7e-45

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-927: 5e-37

Identical with: bmo-mir-927 from miRBase (MNEST035571)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J, PLoS One. 3:e2997(2008)., "The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages"




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