ABOUT THIS RECORD

ID: MNEST035662
species: Bombyx mori
miRNA family: mir-2780
source: miRBase, original name: bmo-mir-2780b-2 (MI0012407)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
CCACGGTGAAAAGGGTGTTAAATGAAGACTTAAGAGCTTCGGGCATATCGGAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGA

dot-bracket secondary structure
(((....((...(((((((((((((.(.(((.....((((((.....))))))......))).).))))))).)))))).))...))).


SIMILARITIES

miRBase bmo-mir-2780b-1: 2e-38 PMRD no hits microPC no hits

UniProt no hits RFAM mir-2780: 1e-34

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references
[1] Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q, BMC Genomics. 11:148(2010)., "MicroRNAs of Bombyx mori identified by Solexa sequencing"