miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST035841
species: Bombyx mori
miRNA family: mir-3267
source: miRBase, original name: bmo-mir-3267a (MI0014323)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGCTTTGAGCTCGTCCACCCATT

miRNA*
TGGGTGGCGGCATTAAGTATTG

mismatches: 5
bulges: 2

View larger
pre-miRNA
CCGCCGAAGATGGGTGGCGGCATTAAGTATTGATGTTTTTGAGATCCGGCAACCACTTAAAATCAGATTGGCTTTGAGCTCGTCCACCCATTGAAGCA

dot-bracket secondary structure
..((....(((((((((((((...((((.....((.(((((((....(....)..))))))).)).....))))...)).)).)))))))))...)).


SIMILARITIES
miRBase bmo-mir-3273: 0.00000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID

references

[1] Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J, Funct Integr Genomics. 10:405-415(2010)., "Novel microRNAs in silkworm (Bombyx mori)"




Liczniki na strone;