ABOUT THIS RECORD

ID: MNEST036584
species: Drosophila melanogaster
miRNA family: mir-1003
source: miRBase, original name: dme-mir-1003 (MI0005864)

Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
GTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAG

dot-bracket secondary structure
((((((((.(((((((((..((..(....)..))..))))))))).))))))))..


SIMILARITIES

miRBase dme-mir-1003: 5e-26 PMRD no hits microPC no hits

UniProt no hits RFAM no hits

Identical with: dsi-mir-1003 from miRBase (MNEST037304)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
deep sequencing data evidence

references
[1] Ruby JG, Jan CH, Bartel DP, Nature. 448:83-86(2007)., "Intronic microRNA precursors that bypass Drosha processing"