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ABOUT THIS RECORD

ID: MNEST037561
species: Locusta migratoria
miRNA family: mir-8
source: miRBase, original name: lmi-mir-8 (MI0010646)

Taxonomy by NCBI:
Locusta migratoria Locusta Oedipodinae Acrididae Acridoidea Acridomorpha Caelifera Orthoptera Orthopteroidea Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAATACTGTCAGGTAACGATGTC

miRNA*
CATCTTACCGGGCAGCATTAGA

mismatches: 4
bulges: 1

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pre-miRNA
CATCTTACCGGGCAGCATTAGATTGCGACTGAGATTTCTAATACTGTCAGGTAACGATGTC

dot-bracket secondary structure
(((((((((.(((((.((((((...(......)...)))))).))))).))))).))))..


SIMILARITIES
miRBase nlo-mir-8: 0.000000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-8: 0.000000003

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa

references

[1] Wei Y, Chen S, Yang P, Ma Z, Kang L, Genome Biol. 10:R6(2009)., "Characterization and comparative profiling of the small RNA transcriptomes in two phases of locust"




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