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ABOUT THIS RECORD
ID:
MNEST037568
species:
Nasonia giraulti
miRNA family:
let-7
source:
miRBase, original name:
ngi-let-7
(
MI0016654
)
Taxonomy by NCBI:
Nasonia giraulti
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGT
miRNA*
TGTACAACTTGCTAACTTTCC
mismatches:
2
bulges:
0
View larger
pre-miRNA
CGACGCCTGGG
TGAGGTAGTAGGTTGTATAGT
GGGGAATGAAAATTCGTCATTATGGAATCCAC
TGTACAACTTGCTAACTTTCC
CGGTTGTCGGCGC
dot-bracket secondary structure
(((((.(((((
.(((.((((((((((((((((
((.((((....)))).((......))..))))
)))))))))))))).))).))
))).)))))....
SIMILARITIES
miRBase
nvi-let-7
:
8e-51
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
let-7: 1e-40
Identical with:
nvi-let-7
from miRBase (
MNEST037629
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Sathyamurthy G, Swamy NR,
Int J Insect Sci. 2:1-13(2010).
,
"Computational Identification and Characterization of Putative miRNAs in Nasonia Species"