miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST037596
species: Nasonia giraulti
miRNA family: mir-932
source: miRBase, original name: ngi-mir-932 (MI0016645)

Taxonomy by NCBI:
Nasonia giraulti Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAATTCCGTAGTGCATTGCAG

miRNA*
GCAAGCACCGCGGGAGTGAGG

mismatches: 3
bulges: 1

View larger
pre-miRNA
CGCGTTGCCTCTTCAATTCCGTAGTGCATTGCAGTAGATTTAAAAGAAAGATTCTGCAAGCACCGCGGGAGTGAGGCGGCTTCGTGTC

dot-bracket secondary structure
((((..(((.(((((.(((((..((((.((((((..(((((.......)))))))))))))))..))))).))))).)))..))))..


SIMILARITIES
miRBase nlo-mir-932: 7e-45

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-932: 1e-43

Identical with: nlo-mir-932 from miRBase (MNEST037626)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"




Liczniki na strone;