ABOUT THIS RECORD

ID: MNEST037681
species: Tribolium castaneum
miRNA family: bantam
source: miRBase, original name: tca-bantam (MI0010584)

Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
TCAGCGAGACGAAACTGGTTTTCACAGTGATTTGACAGATATATTTGATTCTGAGATCATTGTGAAAGCTGATTTTGTTCA

dot-bracket secondary structure
.....(((.(((((..(((((((((((((((((..((((..........)))))))))))))))))))))..)))))))).


SIMILARITIES

miRBase tca-bantam: 9e-41 PMRD no hits microPC no hits

UniProt no hits RFAM bantam: 2e-39

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID

references
[1] Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S, Genome Biol Evol. 2:686-696(2010)., "Functional shifts in insect microRNA evolution"
[2] Griffiths-Jones S, Unpublished (2009).,