ABOUT THIS RECORDspecies: Brugia malayi
miRNA family: mir-2
source: miRBase, original name: bma-mir-2a (MI0013321)
Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATCACAGCCAGCTTTGATGT miRNA* GTCAAAGTGGTCAGTGATGTG mismatches: 1 bulges: 2 |
pre-miRNA
TTCTCCGACACGTCAAAGTGGTCAGTGATGTGTCGCAAAATGAAATTCATATCACAGCCAGCTTTGATGTGTTGTGCGCTTGTCGACCCAT
dot-bracket secondary structure
.....(((((((((((((((((..((((((((...(.....).....)))))))).)))).))))))))))))).................
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
TTCTCCGACACGTCAAAGTGGTCAGTGATGTGTCGCAAAATGAAATTCATATCACAGCCAGCTTTGATGTGTTGTGCGCTTGTCGACCCAT
dot-bracket secondary structure
.....(((((((((((((((((..((((((((...(.....).....)))))))).)))).))))))))))))).................
SIMILARITIES| miRBase cel-mir-2: 0.00000007 PMRD no hits microPC no hits | UniProt no hits RFAM mir-2: 2e-33 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
