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ABOUT THIS RECORD

ID: MNEST038484
species: Caenorhabditis remanei
miRNA family: let-7
source: miRBase, original name: crm-let-7 (MI0011037)

Taxonomy by NCBI:
Caenorhabditis remanei Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGGTAGTAGGTTGTATAGTT

miRNA*
CTATGCAAGTTTCTACCTCACC

mismatches: 2
bulges: 0

View larger
pre-miRNA
GCGGCCGGTCAACACTGTGCGTCTGGTGAGGTAGTAGGTTGTATAGTTTAGAATCTTACCTTGGTGAACTATGCAAGTTTCTACCTCACCAGATACAGAA
TCTTCTCAGCTGC


dot-bracket secondary structure
(((((.((......((((..((((((((((((((.((.((((((((((((..(........)..)))))))))))).)).))))))))))))))))))..
.....)).)))))



SIMILARITIES
miRBase cbr-let-7: 1e-22

PMRD no hits

microPC no hits
UniProt no hits

RFAM let-7: 6e-34

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454

references

[1] de Wit E, Linsen SE, Cuppen E, Berezikov E, Genome Res. 19:2064-2074(2009)., "Repertoire and evolution of miRNA genes in four divergent nematode species"




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