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ABOUT THIS RECORD

ID: MNEST039035
species: Schistosoma mansoni
miRNA family: mir-125_3
source: miRBase, original name: sma-mir-125b (MI0010677)

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCCTGAGACTGATAATTGCTC

miRNA*
GCAATTATTACTCTCAGGTGTA

mismatches: 3
bulges: 0

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pre-miRNA
ATCCCTGAGACTGATAATTGCTCTTTTTATCATGATAAGGGAGTTTGATGAGAGCAATTATTACTCTCAGGTGTA

dot-bracket secondary structure
...(((((((.((((((((((((((...((((.(((......))))))))))))))))))))).)))))))....


SIMILARITIES
miRBase sja-mir-125b: 0.0000009

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W, PLoS One. 3:e4034(2008)., "Identification and characterization of novel microRNAs from Schistosoma japonicum"




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