miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST039304
species: Chlamydomonas reinhardtii
source: miRBase, original name: cre-MIR907 (MI0005700)

Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTCTGCGAGCGGTGCGAGC

miRNA*
TCGCACCGCTCGCAGAAGACA

mismatches: 0
bulges: 0

View larger
pre-miRNA
CCAGCCCAGCGCTCGCACCGCTCGCAGAAGACATCGCTGGCACCGTGTTGGCCGCCATTTGAGCGCTTGGTCACATCGCTGGCACCCACGGCTGGCACCG
TGGCCGCCACTTGACCAAGCGCTAAATATCGGCCAACNCGGTGCCAGCGATGTCTTCTGCGAGCGGTGCGAGCGCTGGGCTGG


dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((((((((((((.((((((((..((((.((((((((((((....(.((((..((((((......)))
)))..))))).))))))))))))))))..)))))))).)))))))))))))))))))))))))))))))))))))))))))))



SIMILARITIES
miRBase no hits

PMRD cre-miR907: 2e-99

microPC no hits
UniProt no hits

RFAM no hits

Identical with: cre-miR907 from PMRD (MNEST048432)

MORE

miRNEST target predictions
non-miRNEST targets: none
additional data
download this record
evidence: cloned

references

[1] Zhao T, Li G, Mi S, Li S, Hannon GJ, Wang XJ, Qi Y, Genes Dev. 21:1190-1203(2007)., "A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii"




Liczniki na strone;