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ABOUT THIS RECORD

ID: MNEST040643
species: Glycine soja
miRNA family: MIR3522
source: miRBase, original name: gso-MIR3522a (MI0015365)

Taxonomy by NCBI:
Glycine soja Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGACCAAATGAGCAGCTGA

miRNA*
AGCTGCTCATCTGTTCTCAGG

mismatches: 2
bulges: 0

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pre-miRNA
ACAGGATCGTCCTGAGACCAAATGAGCAGCTGACCACATGATGCAGCTATGTTTGCTATTCAGCTGCTCATCTGTTCTCAGGTCGCCCTTGT

dot-bracket secondary structure
(((((..((.(((((((.((.((((((((((((...((....(((....))).))....)))))))))))).)).))))))).))..)))))


SIMILARITIES
miRBase gso-MIR3522b: 3e-47

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

Identical with: gso-MIR3522b from miRBase (MNEST040644)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned, Northern

references

[1] Chen R, Hu Z, Zhang H, J Integr Plant Biol. 51:1071-1079(2009)., "Identification of microRNAs in wild soybean (Glycine soja)"




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