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ABOUT THIS RECORD
ID:
MNEST040651
species:
Medicago truncatula
miRNA family:
MIR156
source:
miRBase, original name:
mtr-MIR156d
(
MI0005585
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCATCTTTCTGTCAAA
mismatches:
0
bulges:
2
View larger
pre-miRNA
GAAAT
TGACAGAAGAGAGTGAGCAC
ATAGACACTCGGTATAGATGTATATCGTTGCCTTTGCGT
GCTCACTCATCTTTCTGTCAAA
TTCC
dot-bracket secondary structure
(((.(
((((((((((((((((((((
.((((..(.(((((((....)))))))..)..)))).))
)))))))).)).))))))))).
))).
SIMILARITIES
miRBase
rco-MIR156b
:
0.0000000003
PMRD
ptc-miR156e
:
0.00000007
microPC
miR156
:
0.00002
UniProt
no hits
RFAM
mir-156: 2e-39
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
degradome data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,