ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR164
source: miRBase, original name: mtr-MIR164d (MI0005617)
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAAGCAGGGCACATGCT miRNA* CATGTGCTCTTGCTCTCCATC mismatches: 0 bulges: 2 |
pre-miRNA
CACGTTGGAGAAGCAGGGCACATGCTTGATTTTATCAAAGTTCTGAGCATGTGCTCTTGCTCTCCATCATGG
dot-bracket secondary structure
((.(.((((((.((((((((((((((((((((.....)))))..)))))))))).))))))))))).).)).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
download this record
references
[1] Bonnet E, Unpublished (2007).,
CACGTTGGAGAAGCAGGGCACATGCTTGATTTTATCAAAGTTCTGAGCATGTGCTCTTGCTCTCCATCATGG
dot-bracket secondary structure
((.(.((((((.((((((((((((((((((((.....)))))..)))))))))).))))))))))).).)).
SIMILARITIES| miRBase rco-MIR164d: 0.000003 PMRD vvi-miR164b: 0.00005 microPC no hits | UniProt no hits RFAM MIR164: 3e-34 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
degradome data
download this record
references
[1] Bonnet E, Unpublished (2007).,
