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ABOUT THIS RECORD

ID: MNEST040682
species: Medicago truncatula
miRNA family: MIR169_2
source: miRBase, original name: mtr-MIR169e (MI0005579)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGCCAAGGATGACTTGCCG

miRNA*
GCAGGTCATCCTTCGGCTATAT

mismatches: 1
bulges: 1

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pre-miRNA
GAAATGGAGCCAAGGATGACTTGCCGGTATATTAGTTTGTCGCTAAAGCTAACTAGCTTTAGTTGTTGGGTACTCCCGGCAGGTCATCCTTCGGCTATAT
T


dot-bracket secondary structure
..((((.((((((((((((((((((((..((((........(((((((((....))))))))).....))))...)))))))))))))))).)))).)))
)



SIMILARITIES
miRBase mtr-MIR169m: 5e-52

PMRD phy-miR169: 0.000005

microPC miR169: 0.00002
UniProt no hits

RFAM MIR169_2: 2e-51

Identical with: mtr-MIR169m from miRBase (MNEST040690)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Bonnet E, Unpublished (2007).,




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