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ABOUT THIS RECORD

ID: MNEST040689
species: Medicago truncatula
miRNA family: MIR169_2
source: miRBase, original name: mtr-MIR169l (MI0005631)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAGGTCATCCTTCGGCTATA

mismatches: 1
bulges: 1
View larger
pre-miRNA
 AGATGAAGCCAAGGATGACTTGCCGGTATAATAGTAATTTGCCACAAATCTAGATAGCTATTAGCTATGTTTGGATGGGCGGTGAGATTAACAAAATTAC
AGCAGCATTGTGATTTTGTTGATGCTTTAAAGTGTAGTTTTTATCAAAATTACAGTGGTTCACTGTAATTATGAGAATCTCACCGTCAATCTAAATATGC
ATTTAGTTTCATTTCCGGCAGGTCATCCTTCGGCTATATT

dot-bracket secondary structure
.((((.((((((((((((((((((((..(((((((.(((((.........))))).)))))))((.((((((((((.((((((((((((..((.((((((
((.(.(((((((((((((.(((.(((.........)))..))).))))))))))))).)...)))))))).))..)))))))))))).))))))))))))
..............)))))))))))))))).)))).))))


SIMILARITIES
miRBase mtr-MIR169d: 4e-135

PMRD gma-miR169c: 0.000003

microPC miR169: 0.00005		UniProt no hits

RFAM MIR169_2: 7e-134

Identical with: mtr-MIR169d from miRBase (MNEST040681)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Bonnet E, Unpublished (2007).,



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