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ABOUT THIS RECORD

ID: MNEST040724
species: Medicago truncatula
miRNA family: MIR395
source: miRBase, original name: mtr-MIR395q (MI0005598)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTTTGGGGGAACTC

miRNA*
GTTCCTTTGAACGCTTCATGC

mismatches: 2
bulges: 0

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pre-miRNA
TCTTAGAGTTCCTTTGAACGCTTCATGCATGAGAATATCTATTTGGTCTAAAATCCATTAGAAAAATAGTTCTTCTTAAATGAAGTGTTTGGGGGAACTC
TTGGG


dot-bracket secondary structure
.((.((((((((((..((((((((((...((((((...((((((..(((((......))))).))))))...)))))).))))))))))..)))))))))
).)).



SIMILARITIES
miRBase mtr-MIR395d: 5e-49

PMRD mtr-miR395d: 5e-49

microPC miR395: 0.00002
UniProt no hits

RFAM mir-395: 1e-53

Identical with: mtr-MIR395d from miRBase (MNEST040711)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Bonnet E, Unpublished (2007).,




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