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ABOUT THIS RECORD
ID:
MNEST040743
species:
Medicago truncatula
miRNA family:
MIR399
source:
miRBase, original name:
mtr-MIR399m
(
MI0005608
)
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGCTGCCCTA
miRNA*
GGGCATGTCTCTATTGGCAGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
AGTCATA
GGGCATGTCTCTATTGGCAGG
TGATATAGTGATATGGCTCTAGAAATTCACT
TGCCAAAGGAGAGCTGCCCTA
TGAAT
dot-bracket secondary structure
..(((((
(((((..(((((.((((((((
(((..(((.(......).))).....)))))
)))))).)))))..)))))))
)))..
SIMILARITIES
miRBase
mtr-MIR399n
:
7e-17
PMRD
mtr-miR399d
:
0.000000000000004
microPC
miR399
:
0.0002
UniProt
no hits
RFAM
mir-399: 0.00007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Bonnet E,
Unpublished (2007).
,