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ABOUT THIS RECORD

ID: MNEST040743
species: Medicago truncatula
miRNA family: MIR399
source: miRBase, original name: mtr-MIR399m (MI0005608)

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGAGCTGCCCTA

miRNA*
GGGCATGTCTCTATTGGCAGG

mismatches: 3
bulges: 0

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pre-miRNA
AGTCATAGGGCATGTCTCTATTGGCAGGTGATATAGTGATATGGCTCTAGAAATTCACTTGCCAAAGGAGAGCTGCCCTATGAAT

dot-bracket secondary structure
..((((((((((..(((((.(((((((((((..(((.(......).))).....))))))))))).)))))..))))))))))..


SIMILARITIES
miRBase mtr-MIR399n: 7e-17

PMRD mtr-miR399d: 0.000000000000004

microPC miR399: 0.0002
UniProt no hits

RFAM mir-399: 0.00007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Bonnet E, Unpublished (2007).,




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