ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-3035
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGCGCACTGCTGAGGATTTC miRNA* AGAAACGGCCGTACAGTCCTCACAGGTTTTCT mismatches: 2 bulges: 17 |
pre-miRNA
GGGATCGTGGATGCGCACTGCTGAGGATTTCCACAGTAGGAAGAAACGGCCGTACAGTCCTCACAGGTTTTCTATGGTGGTCTAGTTTC
dot-bracket secondary structure
...((((((((...((.(((.(((((((((((......))))...((....))...))))))))))))..))))))))...........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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GGGATCGTGGATGCGCACTGCTGAGGATTTCCACAGTAGGAAGAAACGGCCGTACAGTCCTCACAGGTTTTCTATGGTGGTCTAGTTTC
dot-bracket secondary structure
...((((((((...((.(((.(((((((((((......))))...((....))...))))))))))))..))))))))...........
SIMILARITIES| miRBase sja-mir-3482: 0.00007 PMRD no hits microPC no hits | UniProt no hits RFAM Hammerhead_1: 1e-18 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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