ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-3078
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCGTGCTGAGATTTCGTCAA miRNA* GATGAAACTCCCAAGATA mismatches: 3 bulges: 3 |
pre-miRNA
GCCTTCTGTATCCGTGCTGAGATTTCGTCAAACACCAGACCACAAGGACTGATGAAACTCCCAAGATAAGTGAAGTGGTACACAC
dot-bracket secondary structure
.(((((..((((..((..(((.((((((((....((.........))..))))))))))).)).))))...)))).)........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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GCCTTCTGTATCCGTGCTGAGATTTCGTCAAACACCAGACCACAAGGACTGATGAAACTCCCAAGATAAGTGAAGTGGTACACAC
dot-bracket secondary structure
.(((((..((((..((..(((.((((((((....((.........))..))))))))))).)).))))...)))).)........
SIMILARITIES| miRBase sja-mir-3492: 0.0000000003 PMRD no hits microPC no hits | UniProt no hits RFAM Hammerhead_1: 9e-20 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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