ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-3130
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGACTGCCGCTCGTTCTG miRNA* CTAATGAGTACGCAATTGCT mismatches: 4 bulges: 5 |
pre-miRNA
AGAGGCTCAACAGAAGACTGCCGCTCGTTCTGTAATACATGTTTAGACTCTGATCATACTCTAATGAGTACGCAATTGCTTGCGCTTCAC
dot-bracket secondary structure
.(((((.((((((.....(((.(((((((..(((.....((.((((...)))).)))))...)))))))..))).))).))).)))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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AGAGGCTCAACAGAAGACTGCCGCTCGTTCTGTAATACATGTTTAGACTCTGATCATACTCTAATGAGTACGCAATTGCTTGCGCTTCAC
dot-bracket secondary structure
.(((((.((((((.....(((.(((((((..(((.....((.((((...)))).)))))...)))))))..))).))).))).)))))..
SIMILARITIES| miRBase sja-mir-3494: 0.00000002 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: sma-miR-3015 from Huang et al. (MNEST044167) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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