ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-60
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTATGCAACGTTTCACTCT miRNA* AGTGGGATGGTTGCATATATACA mismatches: 3 bulges: 2 |
pre-miRNA
CTAGGGGATGAGTGGGATGGTTGCATATATACAATGCTGACAATGTATTATGCAACGTTTCACTCTACCCCAGGGA
dot-bracket secondary structure
((.((((..(((((..(((.(((((((.(((((.((....)).)))))))))))))))..)))))..)))).))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CTAGGGGATGAGTGGGATGGTTGCATATATACAATGCTGACAATGTATTATGCAACGTTTCACTCTACCCCAGGGA
dot-bracket secondary structure
((.((((..(((((..(((.(((((((.(((((.((....)).)))))))))))))))..)))))..)))).))..
SIMILARITIES| miRBase sja-mir-2162: 0.00000000000006 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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