ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-92
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTGCACTAACCTTCGCCTTG miRNA* AGGGGGATGTTTGTGCAATTTA mismatches: 6 bulges: 0 |
pre-miRNA
CATGTTTGTGAGGGGGATGTTTGTGCAATTTAGTGTTGTAAATATATTGCACTAACCTTCGCCTTGCAAATATAGG
dot-bracket secondary structure
.(((((((..(((.(((.(((.(((((((.((..........)).))))))).))).))).)))..)))))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CATGTTTGTGAGGGGGATGTTTGTGCAATTTAGTGTTGTAAATATATTGCACTAACCTTCGCCTTGCAAATATAGG
dot-bracket secondary structure
.(((((((..(((.(((.(((.(((((((.((..........)).))))))).))).))).)))..)))))))...
SIMILARITIES| miRBase sja-mir-3479: 7e-26 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
