ABOUT THIS RECORDspecies: Actinidia deliciosa
source: microPC, original name: miR535
Taxonomy by NCBI:
Actinidia deliciosa Actinidia Actinidiaceae Ericales asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAAGGAGAGAGAGCACGCT miRNA* CGTGCTCTCCTTCGTTGTCA mismatches: 3 bulges: 0 |
pre-miRNA
TGACAAGGAGAGAGAGCACGCTAGTCGACATTCATGCACGGGACATGATTATTGACAAGCGTGCTCTCCTTCGTTGTCA
dot-bracket secondary structure
.(((((.(((.(((((((((((.(((((...((((((....).)))))...))))).))))))))))).))).))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAAGGAGAGAGAGCACGCTAGTCGACATTCATGCACGGGACATGATTATTGACAAGCGTGCTCTCCTTCGTTGTCA
dot-bracket secondary structure
.(((((.(((.(((((((((((.(((((...((((((....).)))))...))))).))))))))))).))).))))).
SIMILARITIES| miRBase aqc-MIR535: 0.00000006 PMRD aqc-miR535: 0.00000006 microPC miR535: 1e-39 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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