miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST044845
species: Helianthus petiolaris
miRNA family: MIR162
source: microPC, original name: miR162

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA

miRNA*
GATTCAGCGGTTCATCGATC

mismatches: 4
bulges: 0

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pre-miRNA
TGGATTCAGCGGTTCATCGATCTGTTCCATAATCCTAATGATTAAATGTTCATACGACGATTGAGAGAGGTGGGAAATGGAATCGATCGATAAACCTCTG
CATCCA


dot-bracket secondary structure
.((((.(((.((((.(((((((.(((((((..(((((....((((.((((.....)))).))))......))))).))))))).))))))).)))).)))
.)))).



SIMILARITIES
miRBase sbi-MIR162: 0.000000005

PMRD osa-miR162a: 0.000000005

microPC miR162: 2e-55
UniProt no hits

RFAM MIR162_2: 0.00000009

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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