ABOUT THIS RECORDspecies: Nicotiana benthamiana
source: microPC, original name: miR169
Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAGGGATGACTTGCCGA miRNA* GGCAAGTTGTCCCTGGCT mismatches: 2 bulges: 0 |
pre-miRNA
AGCCAGGGATGACTTGCCGAGTATTTCTTTGTTTTAATTGCCTGTGGTTTACCAGGGATTTTATATCGGCAAGTTGTCCCTGGCT
dot-bracket secondary structure
(((((((((..((((((((((((..((((((....(((((....)))))...))))))...))).)))))))))..)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AGCCAGGGATGACTTGCCGAGTATTTCTTTGTTTTAATTGCCTGTGGTTTACCAGGGATTTTATATCGGCAAGTTGTCCCTGGCT
dot-bracket secondary structure
(((((((((..((((((((((((..((((((....(((((....)))))...))))))...))).)))))))))..)))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC miR169: 4e-43 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
