ABOUT THIS RECORDspecies: Cucumis melo subsp. melo
source: microPC, original name: miR1533
Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AATAATAATAATAATGA miRNA* mismatches: 5 bulges: 0 |
pre-miRNA
TTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGA
dot-bracket secondary structure
((((..(((((((((...((((((((..((((((....(((.(((..........))).)))))))))..))).)))))...)))))))))..))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
TTATCTTTATTGTTTTCAAGTAGTTGTTCATTTTATGGTGCGAGTGTGTCTGTAAATTAGCAAAAGTGCTTAATTTACTGTTAAATAATAATAATAATGA
dot-bracket secondary structure
((((..(((((((((...((((((((..((((((....(((.(((..........))).)))))))))..))).)))))...)))))))))..))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
