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ABOUT THIS RECORD
ID:
MNEST045129
species:
Liriodendron tulipifera
miRNA family:
MIR319
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Liriodendron tulipifera
Liriodendron
Magnoliaceae
Magnoliales
magnoliids
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGAGCTCC
miRNA*
AGCTCTCTTCAGTCCAGTC
mismatches:
0
bulges:
0
View larger
pre-miRNA
GG
AGCTCTCTTCAGTCCAGTC
CAAGATAGTATTAAGCCAATCTCCGCTGCTGACTCGTTGGCTCATGAACTCATCCAACGGCTAGGATTCCGATGTGTTT
TTGATCCAACGATGCGGGAGCCGTGTTTGGTTCTGTCTGTCTCGTC
TTGGACTGAAGGGAGCTCC
dot-bracket secondary structure
((
(((((((((((((((((..
(.((((((.((..((((((.(.(.(((.(((..(((((((.(((.((((.((((....((........)))))).))))
.))).)))))))..))).))).).).))))))..)))))))).)..
)))))))))))))))))))
SIMILARITIES
miRBase
vvi-MIR319b
:
0.0000000000001
PMRD
ltu-miR319
:
2e-90
microPC
miR319
:
2e-90
UniProt
no hits
RFAM
MIR159: 0.000000000003
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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