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ABOUT THIS RECORD
ID:
MNEST045309
species:
Liriodendron tulipifera
source:
microPC, original name:
miR319
Taxonomy by NCBI:
Liriodendron tulipifera
Liriodendron
Magnoliaceae
Magnoliales
magnoliids
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGAGCTCCC
miRNA*
GAGCTCTCTTCAGTCCAGTC
mismatches:
1
bulges:
0
View larger
pre-miRNA
G
GAGCTCTCTTCAGTCCAGTC
CAAGATAGTATTAAGCCAATCTCCGCTGCTGACTCGTTGGCTCATGAACTCATCCAACGGCTAGGATTCCGATGTGTTT
TTGATCCAACGATGCGGGAGCCGTGTTTGGTTCTGTCTGTCTCGTC
TTGGACTGAAGGGAGCTCCC
dot-bracket secondary structure
(
((((((((((((((((((..
(.((((((.((..((((((.(.(.(((.(((..(((((((.(((.((((.((((....((........)))))).))))
.))).)))))))..))).))).).).))))))..)))))))).)..
))))))))))))))))))).
SIMILARITIES
miRBase
vvi-MIR319b
:
0.00000000000004
PMRD
ltu-miR319
:
4e-91
microPC
miR319
:
2e-90
UniProt
no hits
RFAM
MIR159: 0.0000000000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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