ABOUT THIS RECORDspecies: Oryza sativa
source: microPC, original name: miR809
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAATATGGGAAATGTTAGAAT miRNA* TCTGGCATTTCTCATATTCATA mismatches: 0 bulges: 0 |
pre-miRNA
ATTCTGGCATTTCTCATATTCATATTGATGCTAACGAATCTAGACATATATATCCATCTAGATTCATTAACATTAATATGAATATGGGAAATGTTAGAAT
dot-bracket secondary structure
((((((((((((((((((((((((((((((.(((.(((((((((............))))))))).))).))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATTCTGGCATTTCTCATATTCATATTGATGCTAACGAATCTAGACATATATATCCATCTAGATTCATTAACATTAATATGAATATGGGAAATGTTAGAAT
dot-bracket secondary structure
((((((((((((((((((((((((((((((.(((.(((((((((............))))))))).))).))))))))))))))))))))))))))))))
SIMILARITIES| miRBase osa-MIR808: 2e-26 PMRD osa-miR808: 2e-26 microPC miR808: 8e-51 | UniProt no hits RFAM MIR1122: 7e-27 |
Identical with: miR808 from microPC (MNEST046758) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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