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ABOUT THIS RECORD
ID:
MNEST045348
species:
Oryza sativa
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGCCAAGGATGACTTGCCG
miRNA*
GCAAGTTGTCCTTGGCT
mismatches:
3
bulges:
0
View larger
pre-miRNA
CAGCCAAGGATGACTTGCCG
GTACGTGTATGCATGTTTCAAGGTACTATATGTGCCCCCAACTGTTTTAGATCCATGCTGACATTTTCCG
GCAAGTTGTC
CTTGGCT
dot-bracket secondary structure
.(((((((((..((((((((
(...((((..(((((..((..(((((.....)))))..(....).....))..)))))..))))...)))
))))))..))
)))))))
SIMILARITIES
miRBase
osa-MIR169b
:
4e-56
PMRD
osa-miR169b
:
4e-56
microPC
miR169
:
4e-56
UniProt
no hits
RFAM
MIR169_2: 7e-55
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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