miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST045354
species: Oryza sativa
miRNA family: MIR1430
source: microPC, original name: miR1430

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGTGAGCCTTCATGGCTAAG

miRNA*
TAGCCAAGAATGGCTTGCCTATC

mismatches: 4
bulges: 2

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pre-miRNA
TTAGCCAAGAATGGCTTGCCTATCTCCACTATTTGGTTCATCACTGGAACACACTTGGGGTTCTCCGATGGTGGATGAAATATGGAAGATGGTGAGCCTT
CATGGCTAAG


dot-bracket secondary structure
(((((((.(((.((((..((.(((((((.(((((.((((((((.((((..((.(....)))..)))).)))))))).)))))))).))))))..))))))
).))))))).



SIMILARITIES
miRBase osa-MIR1430: 4e-53

PMRD osa-miR1430: 4e-53

microPC miR1430: 6e-58
UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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