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ABOUT THIS RECORD
ID:
MNEST045354
species:
Oryza sativa
miRNA family:
MIR1430
source:
microPC, original name:
miR1430
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGAGCCTTCATGGCTAAG
miRNA*
TAGCCAAGAATGGCTTGCCTATC
mismatches:
4
bulges:
2
View larger
pre-miRNA
T
TAGCCAAGAATGGCTTGCCTATC
TCCACTATTTGGTTCATCACTGGAACACACTTGGGGTTCTCCGATGGTGGATGAAATATGGAAGA
TGGTGAGCCTT
CATGGCTAAG
dot-bracket secondary structure
(
((((((.(((.((((..((.(((
((((.(((((.((((((((.((((..((.(....)))..)))).)))))))).)))))))).)))
)))..))))))
).))))))).
SIMILARITIES
miRBase
osa-MIR1430
:
4e-53
PMRD
osa-miR1430
:
4e-53
microPC
miR1430
:
6e-58
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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