miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST045434
species: Helianthus petiolaris
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC

miRNA*
AATGTTGTCTGGCTCGAGA

mismatches: 4
bulges: 0

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pre-miRNA
GGAATGTTGTCTGGCTCGAGACCACAAGAAAGCTTCAATCTTTATAATCTTTATGTTACATAATCACATAATTGATCAATCTTTGTTGATCAATGATTAA
AGATTAGAATCTTGTGTTGTCGGACCAGGCTTCATTCC


dot-bracket secondary structure
((((((..((((((..(((.(.(((((((....(((((((((((..(((..(((((.........))))).(((((((((....))))))))).))))))
))))).)))))))))).).)))..))))))..))))))



SIMILARITIES
miRBase sly-MIR166b: 0.0000004

PMRD sly-miR166b: 0.0000004

microPC miR166: 2e-74
UniProt no hits

RFAM mir-166: 0.000008

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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