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ABOUT THIS RECORD

ID: MNEST045709
species: Helianthus tuberosus
source: microPC, original name: miR156

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCAC

miRNA*
GCTCATGATCTATCTGTC

mismatches: 2
bulges: 1

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pre-miRNA
GACAGAAGAGAGTGAGCACACAAAGGCAAATTGTACCAATTTGTGTTGTATGATTGTTTTGGGTGCTCATGATCTATCTGTC

dot-bracket secondary structure
(((((((((..((((((((...(((((((.(..(((.(((....))))))..))))))))..))))))))..))).))))))


SIMILARITIES
miRBase ath-MIR156a: 0.000000001

PMRD ath-miR156a: 0.000000001

microPC miR156: 2e-41
UniProt no hits

RFAM mir-156: 0.00000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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