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ABOUT THIS RECORD

ID: MNEST045749
species: Centaurea solstitialis
miRNA family: MIR162
source: microPC, original name: miR162

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCAG

miRNA*
GGAGTCAGCGGTTTATCGATC

mismatches: 4
bulges: 0

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pre-miRNA
TTGGAGTCAGCGGTTTATCGATCAGTTCCTTTTAACAAACGCATGAACAAGAGAGAGCGAGCGTAAAAGAGGAATCGATCGATAAACCTCTGCATCCAG

dot-bracket secondary structure
.((((..(((.((((((((((((.(((((((((.....((((.((..(......)..)).))))..))))))))).)))))))))))).)))..)))).


SIMILARITIES
miRBase sbi-MIR162: 0.000000001

PMRD osa-miR162a: 0.000000001

microPC miR162: 3e-50
UniProt no hits

RFAM MIR162_2: 0.00000002

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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