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ABOUT THIS RECORD

ID: MNEST045765
species: Lactuca saligna
source: microPC, original name: miR159

Taxonomy by NCBI:
Lactuca saligna Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAATA

mismatches: 2
bulges: 0

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pre-miRNA
TAGAGCTCCTTGAAGTCCAATAGAGGATCTGAGTGGGAATATCGAGCTGCTGGTCTATGGATCCCTCAAGTCCTATCTTTGTTGTTGTATAGGCTTTGTG
GCTTGCATACGCCAGGAGATTCATTATCCTTTTTCTGATCCTTTTTTGGATTGAAGGGAGCTCTA


dot-bracket secondary structure
(((((((((((..(((((((.((((((((.(((.((((.((..(((((.(((((.((((.(..((.((((.((((((.........).))))).)))).)
)..).)))).))))).)).)))..))))))..))).)))))))).)))))))..)))))))))))



SIMILARITIES
miRBase rco-MIR159: 0.0000000001

PMRD vvi-miR159c: 0.00000003

microPC miR159: 2e-90
UniProt no hits

RFAM MIR159: 0.000000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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