miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST045810
species: Centaurea solstitialis
source: microPC, original name: miR156

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCA

miRNA*
CCCACTTCTCTTGCTGTCA

mismatches: 2
bulges: 2

View larger
pre-miRNA
TGACAGAAGAGAGTGAGCATATGCAAAGCAATTGTATAGAAAAACTATACATTTGTTGGAATTATGCGTGTGCCCACTTCTCTTGCTGTCA

dot-bracket secondary structure
.((((((((((((((.(((((((((.(((((.(((((((.....))))))).))))).......))))))))).))).)))))).))))).


SIMILARITIES
miRBase osa-MIR156l: 0.00007

PMRD vvi-miR156d: 0.00007

microPC miR156: 2e-45
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;