ABOUT THIS RECORDspecies: Salvia miltiorrhiza
miRNA family: MIR157
source: microPC, original name: miR157
Taxonomy by NCBI:
Salvia miltiorrhiza Salvia Mentheae Nepetoideae Lamiaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGATAGAGAGCAC miRNA* ACTCTCTATACTTCTGTCA mismatches: 2 bulges: 1 |
pre-miRNA
TGACAGAAGATAGAGAGCACCAACGATGAAGTTGCAAACTTTGCATCTCACTCCTTTGTACTCTCTATACTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((.((.((.(((((.(.((((.....)))).)))).)).)).)).)))))))).)))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGATAGAGAGCACCAACGATGAAGTTGCAAACTTTGCATCTCACTCCTTTGTACTCTCTATACTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((.((.((.(((((.(.((((.....)))).)))).)).)).)).)))))))).)))))))).
SIMILARITIES| miRBase vvi-MIR156g: 0.00000000006 PMRD vvi-miR156g: 0.00000000006 microPC miR157: 5e-39 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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