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ABOUT THIS RECORD
ID:
MNEST046135
species:
Hordeum vulgare
source:
microPC, original name:
miR171
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGTGCCAATAT
miRNA*
GTTGGCTCGACTCACTCAGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
AT
GTTGGCTCGACTCACTCAGA
CCACGCCGGAGGGAGCCATCTGCGGCGGCGGTTC
TGATTGAGCCGTGCCAATAT
dot-bracket secondary structure
((
((((((.((.((((.(((((
((.(((((.(((......))).)))))..)).))
))).)))).)).))))))))
SIMILARITIES
miRBase
hvu-MIR171
:
8e-38
PMRD
hvv-miR171
:
8e-38
microPC
miR171
:
8e-38
UniProt
no hits
RFAM
MIR171_1: 0.000004
Identical with:
hvv-miR171
from PMRD (
MNEST048663
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
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