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ABOUT THIS RECORD

ID: MNEST046149
species: Solanum tuberosum
source: microPC, original name: miR156

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCAC

miRNA*
GCTCTCTATGCTTCTG

mismatches: 0
bulges: 1

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pre-miRNA
CAGAAGATAGAGAGCACTAATGATGATATGCTAATTTCATTCAGCAAAAGCATCTCACTTCATTTGTGCTCTCTATGCTTCTG

dot-bracket secondary structure
(((((((((((((((((.((((((((.(((((................))))).)))..))))).))))))))))).))))))


SIMILARITIES
miRBase sly-MIR156a: 8e-26

PMRD stu-miR157a: 6e-42

microPC miR157: 6e-42
UniProt no hits

RFAM no hits

Identical with: miR157 from microPC (MNEST045968)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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