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ABOUT THIS RECORD

ID: MNEST046153
species: Nicotiana langsdorffii x Nicotiana sanderae
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Nicotiana langsdorffii x Nicotiana sanderae Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTTCTCTTTCTGTCA

mismatches: 1
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGTGAGCACACGCACACAATTGTATACAGTGTATACTTTTGTGTTTATATTATTTGCGTGTGCTCACTTCTCTTTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((((((((((((..((((((...))))))..))))))...........)))))))))))).)))).))))))).


SIMILARITIES
miRBase tcc-MIR156c: 0.000000004

PMRD stu-miR156a: 0.00000007

microPC miR156: 3e-47		UniProt no hits

RFAM mir-156: 0.00000008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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