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ABOUT THIS RECORD

ID: MNEST046166
species: Lotus japonicus
source: microPC, original name: miR167

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGCTGCCAGCATGATCT

miRNA*
ATCATATGGCAGCTT

mismatches: 1
bulges: 1

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pre-miRNA
AAGCTGCCAGCATGATCTGAGCTTACCTTCTTGTAATAATGGTAAGAACAGATCATATGGCAGCTT

dot-bracket secondary structure
(((((((((..((((((((..((((((.............))))))..)))))))).)))))))))


SIMILARITIES
miRBase lja-MIR167: 6e-32

PMRD lja-miR167: 6e-32

microPC miR167: 6e-32
UniProt no hits

RFAM MIR167_1: 0.00001

Identical with: lja-MIR167 from miRBase (MNEST040645)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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