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ABOUT THIS RECORD

ID: MNEST046302
species: Raphanus sativus var. oleiformis
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Raphanus sativus var. oleiformis Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCACGATCTA

miRNA*
GATCATGTTTGCAGTTTC

mismatches: 3
bulges: 0

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pre-miRNA
TGAAGCTGCCAGCACGATCTAATTAACTTTCTTTCTCCGTTTGTTTTCATGACGATGGAAAGAGATGAGTGTAGATTAGATCATGTTTGCAGTTTC

dot-bracket secondary structure
.((((((((.((((.(((((((((.(((((((((.((((((.(((.....))))))))).))))).))))...))))))))).)))).))))))))


SIMILARITIES
miRBase bra-MIR167c: 6e-24

PMRD bra-miR167c: 6e-24

microPC miR167: 1e-49
UniProt no hits

RFAM MIR167_1: 0.0000000000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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