miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST046389
species: Hordeum vulgare
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGACGCCGGGTCCGAAA

mismatches: 2
bulges: 0

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pre-miRNA
GGGGAATGACGCCGGGTCCGAAAGAGAGACGCTCGCATGGCGTGCGCGTGGTGCGTTTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
(((((((((.(((.(((((((((..........(((((.(((....))).)))))))))))))).))).)))))))))


SIMILARITIES
miRBase hvu-MIR166c: 1e-33

PMRD hvv-miR166: 1e-33

microPC miR166: 5e-39
UniProt no hits

RFAM mir-166: 1e-37

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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