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ABOUT THIS RECORD

ID: MNEST046696
species: Centaurea solstitialis
source: microPC, original name: miR159

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCT

miRNA*
AGCTCCTTGAAGTCCAATA

mismatches: 2
bulges: 0

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pre-miRNA
AGAGCTCCTTGAAGTCCAATAGAGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTGT
GGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTTTTTGGATTGAAGGGAGCTCT


dot-bracket secondary structure
((((((((((..(((((((.((((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).)))).
))..).))))).)))).))).)))))..)))))))...)))))))).)))))))..))))))))))



SIMILARITIES
miRBase vvi-MIR159c: 0.00000000004

PMRD vvi-miR159c: 0.00000000004

microPC miR159: 1e-78
UniProt no hits

RFAM MIR159: 0.0000000006

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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