miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST046707
species: Nicotiana langsdorffii x Nicotiana sanderae
source: microPC, original name: miR156

Taxonomy by NCBI:
Nicotiana langsdorffii x Nicotiana sanderae Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTTCTCTTTCTGTC

mismatches: 0
bulges: 2

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pre-miRNA
GACAGAAGAGAGTGAGCACACGCACACAATTGTATACAGTGTATACTTTTGTGTTTATATTATTTGCGTGTGCTCACTTCTCTTTCTGTC

dot-bracket secondary structure
(((((((((((((((((((((((((((((..((((((...))))))..))))))...........)))))))))))).)))).)))))))


SIMILARITIES
miRBase tcc-MIR156c: 0.00000002

PMRD stu-miR156a: 0.0000003

microPC miR156: 4e-46
UniProt no hits

RFAM mir-156: 0.0000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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